relion¶

Description¶

RELION (for REgularized LIkelihood OptimizatioN) implements an empirical Bayesian approach for analysis of electron cryo-microscopy (Cryo-EM). Specifically it provides methods of refinement of singular or multiple 3D reconstructions as well as 2D class averages. RELION is an important tool in the study of living cells.

NGC Catalog¶

https://ngc.nvidia.com/catalog/containers/hpc:relion

Available Versions on RCAC Clusters¶

Cluster	Versions
ANVIL	3.1.0, 3.1.2, 3.1.3, 4.0.1, 5.0.0
GAUTSCHI	2.1.b1, 3.0.8, 3.1.0, 3.1.2, 3.1.3, 4.0.1, 5.0.0
GILBRETH	2.1.b1, 3.0.8, 3.1.0, 3.1.2, 3.1.3, 4.0.1, 5.0.0
SCHOLAR	2.1.b1, 3.0.8, 3.1.0, 3.1.2, 3.1.3, 4.0.1, 5.0.0

Module¶

You can load the container module by:

module load ngc
module load relion

Note for using relion

Run module spider relion beforehand to check available versions and any prerequisite modules.